Working Group 4
Data science and data management
Objectives and Activities
The primary focus of WG4 is to create a knowledge-sharing community among experts and people interested in the bioinformatic analysis of the gut microbiota within in vitro systems. This encompasses the identification, organisation and cataloguing of FAIR microbiome data sources, resources and tools related to multi-omics data from the gut. After identification, we aim to evaluate each tools suitability for studying in vitro models of the gut and provide guidance to users.
Working group leaders
Thomas C. A. Hitch
WG4 leader
Enrique Carrillo de Santa Pau
WG4 VCo-leader
Tasks
Create FAIR catalogues for the gut omics data.
Review in silico approaches for multi-omic data analysis
Benchmark in silico approaches for gut microbiota analysis
Develop training materials: design, organize, and implement training material for gut data
Deliverables
A public catalogue of open data and bioinformatics resources. Due at month 15.
Report on state-of-the-art data integration methods for gut microbiome data. Due at month 24.
Publication with the findings and summarizing the results from D4.1-D4.2. Due at month 36.
Training materials and subsequent revisions. Due at month 24-36.